Whole genome seq of Eschericia coli: urinary tract - upec-82 - SRA

SRX560597: Whole genome seq of Eschericia coli: urinary tract - upec-82
1 ILLUMINA (Illumina HiSeq 2000) run: 2M spots, 338.7M bases, 256.4Mb downloads

Design: DNA was extracted using Wizard Genomic DNA Purification Kit (Promega). Shotgun sequencing libraries were prepared using the Nextera system (Epicentre BioTechnologies), PCR amplified using FailSafe E PCR mix (Epicentre), monitored by real-time PCR, and removed when exponential growth of product was first observed. Libraries were purified using Agencourt AMPure XP (Beckman Coulter).

Submitted by: University of Washington

Study: Escherichia coli Genome sequencing and assembly

PRJNA248737 • SRP042632 • All experiments • All runs

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Whole genome sequencing of extraintestinal pathogenic clinical E. coli strains

Sample:

SAMN02802177 • SRS624893 • All experiments • All runs

Organism: Escherichia coli

Library:

Name: upec-82

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Runs: 1 run, 2M spots, 338.7M bases, 256.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR1314580	1,995,246	338.7M	256.4Mb	2014-10-26

ID:: 800601

SRA

Sequence Read Archive

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